Main window to control and display an ultracentrifugation simulation. More...

#include "us_astfem_sim.h"

Inheritance diagram for US_Astfem_Sim:

Collaboration diagram for US_Astfem_Sim:

Public Member Functions
	US_Astfem_Sim (QWidget *=0, Qt::WindowFlags=0)

Public Member Functions inherited from US_Widgets
	US_Widgets (bool=true, QWidget *p=0, Qt::WindowFlags f=0)

	~US_Widgets (void)

QLabel *	us_label (const QString &, int=0, int=QFont::Bold)

QLabel *	us_textlabel (const QString &, int=-1, int=QFont::Bold)

QLabel *	us_banner (const QString &, int=0, int=QFont::Bold)

QPushButton *	us_pushbutton (const QString &, bool=true, int=0)

QTextEdit *	us_textedit (void)

QLineEdit *	us_lineedit (const QString &=0, int=-1, bool=false)

void	us_setReadOnly (QLineEdit *, bool=true)

void	us_setReadOnly (QTextEdit *, bool=true)

QListWidget *	us_listwidget (int=0)

QGridLayout *	us_checkbox (const QString &, QCheckBox *&, bool=false)

QGridLayout *	us_radiobutton (const QString &text, QRadioButton *&rb, bool state=false)

QProgressBar *	us_progressBar (int, int, int=0)

QComboBox *	us_comboBox (void)

QLCDNumber *	us_lcd (int, int=0)

QwtCounter *	us_counter (int, double, double, double=0.0)

QwtPlot *	us_plot (const QString &, const QString &=QString(), const QString &=QString())

QwtPlotGrid *	us_grid (QwtPlot *)

QwtPlotCurve *	us_curve (QwtPlot *, const QString &)

QwtPlotPicker *	us_picker (QwtPlot *)

QTabWidget *	us_tabwidget (int=0, int=QFont::Bold)

void	write_plot (const QString &, const QwtPlot *)
	Write a plot file (PNG or SVG+PNG) from a plot. More...

int	clean_etc_dir (bool=false)
	Clean install and work ./etc directories. More...

Private Slots
void	new_model (void)

void	change_model (US_Model)

void	new_buffer (void)

void	change_buffer (US_Buffer)

void	change_status (void)

void	set_parameters (void)

void	sim_parameters (void)

void	start_simulation (void)

void	stop_simulation (void)

void	save_scans (void)

void	update_progress (int)

void	update_component (int)

void	start_calc (int)

void	show_progress (int)

void	calc_over (void)

void	update_movie_plot (QVector< double > , double )

void	update_save_movie (bool)

void	update_time (double time)

void	update_speed (int speed)

void	help (void)

void	update_time_corr (void)

Private Member Functions
void	init_simparams (void)

void	save_xla (const QString &)

void	save_ultrascan (const QString &)

void	finish (void)

void	ri_noise (void)

void	random_noise (void)

void	ti_noise (void)

void	plot (void)

void	dump_system (void)

void	dump_simparms (void)

void	dump_astfem_data (void)

void	dump_simComponent (US_Model::SimulationComponent &)

void	dump_association (US_Model::Association &)

void	dump_mfem_initial (US_Model::MfemInitial &)

void	dump_ss (US_SimulationParameters::SpeedProfile &)

void	dump_mfem_scan (US_DataIO::Scan &)

Private Attributes
bool	stopFlag

bool	movieFlag

bool	save_movie

bool	time_correctionFlag

double	total_conc

int	curve_count

int	image_count

int	dbg_level

QString	imagedir

QString	imageName

QCheckBox *	ck_movie

QCheckBox *	ck_savemovie

QCheckBox *	ck_timeCorr

QPushButton *	pb_saveExp

QPushButton *	pb_saveSim

QPushButton *	pb_buffer

QPushButton *	pb_simParms

QPushButton *	pb_changeModel

QPushButton *	pb_start

QPushButton *	pb_stop

QTextEdit *	te_status

QLabel *	lb_component

QLabel *	lb_progress

QLCDNumber *	lcd_time

QLCDNumber *	lcd_speed

QLCDNumber *	lcd_component

QProgressBar *	progress

QwtPlot *	moviePlot

QwtPlot *	scanPlot

US_Plot *	plot1

US_Plot *	plot2

US_Help	showhelp

QString	progress_text

int	progress_value

int	progress_maximum

US_Astfem_RSA *	astfem_rsa

US_LammAstfvm *	astfvm

US_Model	system

US_Buffer	buffer

US_SimulationParameters	simparams

US_SimulationParameters	working_simparams

US_DataIO::RawData	sim_data

Additional Inherited Members
Static Public Member Functions inherited from US_Widgets
static QFont	fixedFont (void)

Public Attributes inherited from US_Widgets
US_Global	g
	Connect to global memory and make the values accessible. More...

QPalette	vlgray
	Very light gray palette for read-only line edits. More...

Detailed Description

Main window to control and display an ultracentrifugation simulation.

Definition at line 26 of file us_astfem_sim.h.

Constructor & Destructor Documentation

US_Astfem_Sim::US_Astfem_Sim	(	QWidget *	p = `0`,
		Qt::WindowFlags	f = `0`
	)

Parameters

p	- Parent widget, normally not specified
f	- Window flags, normally not specified

Definition at line 35 of file us_astfem_sim.cpp.

Member Function Documentation

void US_Astfem_Sim::calc_over ( void )

privateslot

Definition at line 1044 of file us_astfem_sim.cpp.

void US_Astfem_Sim::change_buffer ( US_Buffer b )

privateslot

Definition at line 271 of file us_astfem_sim.cpp.

void US_Astfem_Sim::change_model ( US_Model m )

privateslot

Definition at line 241 of file us_astfem_sim.cpp.

void US_Astfem_Sim::change_status ( void )

privateslot

Definition at line 281 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_association ( US_Model::Association & as )

private

Definition at line 1184 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_astfem_data ( void )

private

Definition at line 1231 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_mfem_initial ( US_Model::MfemInitial & mfem )

private

Definition at line 1176 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_mfem_scan ( US_DataIO::Scan & )

private

Definition at line 1260 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_simComponent ( US_Model::SimulationComponent & sc )

private

Definition at line 1154 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_simparms ( void )

private

Definition at line 1194 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_ss ( US_SimulationParameters::SpeedProfile & sp )

private

Definition at line 1218 of file us_astfem_sim.cpp.

void US_Astfem_Sim::dump_system ( void )

private

Definition at line 1136 of file us_astfem_sim.cpp.

void US_Astfem_Sim::finish ( void )

private

Definition at line 633 of file us_astfem_sim.cpp.

void US_Astfem_Sim::help ( void )

inlineprivateslot

Definition at line 134 of file us_astfem_sim.h.

void US_Astfem_Sim::init_simparams ( void )

private

Definition at line 186 of file us_astfem_sim.cpp.

void US_Astfem_Sim::new_buffer ( void )

privateslot

Definition at line 260 of file us_astfem_sim.cpp.

void US_Astfem_Sim::new_model ( void )

privateslot

Definition at line 233 of file us_astfem_sim.cpp.

void US_Astfem_Sim::plot ( void )

private

Definition at line 731 of file us_astfem_sim.cpp.

void US_Astfem_Sim::random_noise ( void )

private

Definition at line 692 of file us_astfem_sim.cpp.

void US_Astfem_Sim::ri_noise ( void )

private

Definition at line 677 of file us_astfem_sim.cpp.

void US_Astfem_Sim::save_scans ( void )

privateslot

Definition at line 799 of file us_astfem_sim.cpp.

void US_Astfem_Sim::save_ultrascan ( const QString & )

private

void US_Astfem_Sim::save_xla ( const QString & dirname )

private

Definition at line 814 of file us_astfem_sim.cpp.

void US_Astfem_Sim::set_parameters ( void )

privateslot

Definition at line 328 of file us_astfem_sim.cpp.

void US_Astfem_Sim::show_progress ( int time_step )

privateslot

Definition at line 1026 of file us_astfem_sim.cpp.

void US_Astfem_Sim::sim_parameters ( void )

privateslot

Definition at line 316 of file us_astfem_sim.cpp.

void US_Astfem_Sim::start_calc ( int steps )

privateslot

Definition at line 1032 of file us_astfem_sim.cpp.

void US_Astfem_Sim::start_simulation ( void )

privateslot

Definition at line 348 of file us_astfem_sim.cpp.

void US_Astfem_Sim::stop_simulation ( void )

privateslot

Definition at line 337 of file us_astfem_sim.cpp.

void US_Astfem_Sim::ti_noise ( void )

private

Definition at line 707 of file us_astfem_sim.cpp.

void US_Astfem_Sim::update_component ( int component )

privateslot

Definition at line 1019 of file us_astfem_sim.cpp.

void US_Astfem_Sim::update_movie_plot	(	QVector< double > *	x,
		double *	c
	)

privateslot

Definition at line 1052 of file us_astfem_sim.cpp.

void US_Astfem_Sim::update_progress ( int component )

privateslot

Definition at line 994 of file us_astfem_sim.cpp.

void US_Astfem_Sim::update_save_movie ( bool ckd )

privateslot

Definition at line 1112 of file us_astfem_sim.cpp.

void US_Astfem_Sim::update_speed ( int speed )

inlineprivateslot

Definition at line 131 of file us_astfem_sim.h.

void US_Astfem_Sim::update_time ( double time )

inlineprivateslot

Definition at line 128 of file us_astfem_sim.h.

void US_Astfem_Sim::update_time_corr ( void )

inlineprivateslot

Definition at line 137 of file us_astfem_sim.h.

Member Data Documentation

US_Astfem_RSA* US_Astfem_Sim::astfem_rsa

private

Definition at line 81 of file us_astfem_sim.h.

US_LammAstfvm* US_Astfem_Sim::astfvm

private

Definition at line 82 of file us_astfem_sim.h.

US_Buffer US_Astfem_Sim::buffer

private

Definition at line 84 of file us_astfem_sim.h.

QCheckBox* US_Astfem_Sim::ck_movie

private

Definition at line 47 of file us_astfem_sim.h.

QCheckBox* US_Astfem_Sim::ck_savemovie

private

Definition at line 48 of file us_astfem_sim.h.

QCheckBox* US_Astfem_Sim::ck_timeCorr

private

Definition at line 49 of file us_astfem_sim.h.

int US_Astfem_Sim::curve_count

private

Definition at line 41 of file us_astfem_sim.h.

int US_Astfem_Sim::dbg_level

private

Definition at line 43 of file us_astfem_sim.h.

int US_Astfem_Sim::image_count

private

Definition at line 42 of file us_astfem_sim.h.

QString US_Astfem_Sim::imagedir

private

Definition at line 44 of file us_astfem_sim.h.

QString US_Astfem_Sim::imageName

private

Definition at line 45 of file us_astfem_sim.h.

QLabel* US_Astfem_Sim::lb_component

private

Definition at line 61 of file us_astfem_sim.h.

QLabel* US_Astfem_Sim::lb_progress

private

Definition at line 62 of file us_astfem_sim.h.

QLCDNumber* US_Astfem_Sim::lcd_component

private

Definition at line 66 of file us_astfem_sim.h.

QLCDNumber* US_Astfem_Sim::lcd_speed

private

Definition at line 65 of file us_astfem_sim.h.

QLCDNumber* US_Astfem_Sim::lcd_time

private

Definition at line 64 of file us_astfem_sim.h.

bool US_Astfem_Sim::movieFlag

private

Definition at line 37 of file us_astfem_sim.h.

QwtPlot* US_Astfem_Sim::moviePlot

private

Definition at line 69 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_buffer

private

Definition at line 53 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_changeModel

private

Definition at line 55 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_saveExp

private

Definition at line 51 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_saveSim

private

Definition at line 52 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_simParms

private

Definition at line 54 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_start

private

Definition at line 56 of file us_astfem_sim.h.

QPushButton* US_Astfem_Sim::pb_stop

private

Definition at line 57 of file us_astfem_sim.h.

US_Plot* US_Astfem_Sim::plot1

private

Definition at line 72 of file us_astfem_sim.h.

US_Plot* US_Astfem_Sim::plot2

private

Definition at line 73 of file us_astfem_sim.h.

QProgressBar* US_Astfem_Sim::progress

private

Definition at line 67 of file us_astfem_sim.h.

int US_Astfem_Sim::progress_maximum

private

Definition at line 79 of file us_astfem_sim.h.

QString US_Astfem_Sim::progress_text

private

Definition at line 77 of file us_astfem_sim.h.

int US_Astfem_Sim::progress_value

private

Definition at line 78 of file us_astfem_sim.h.

bool US_Astfem_Sim::save_movie

private

Definition at line 38 of file us_astfem_sim.h.

QwtPlot* US_Astfem_Sim::scanPlot

private

Definition at line 70 of file us_astfem_sim.h.

US_Help US_Astfem_Sim::showhelp

private

Definition at line 75 of file us_astfem_sim.h.

US_DataIO::RawData US_Astfem_Sim::sim_data

private

Definition at line 87 of file us_astfem_sim.h.

US_SimulationParameters US_Astfem_Sim::simparams

private

Definition at line 85 of file us_astfem_sim.h.

bool US_Astfem_Sim::stopFlag

private

Definition at line 36 of file us_astfem_sim.h.

US_Model US_Astfem_Sim::system

private

Definition at line 83 of file us_astfem_sim.h.

QTextEdit* US_Astfem_Sim::te_status

private

Definition at line 59 of file us_astfem_sim.h.

bool US_Astfem_Sim::time_correctionFlag

private

Definition at line 39 of file us_astfem_sim.h.

double US_Astfem_Sim::total_conc

private

Definition at line 40 of file us_astfem_sim.h.

US_SimulationParameters US_Astfem_Sim::working_simparams

private

Definition at line 86 of file us_astfem_sim.h.

The documentation for this class was generated from the following files:

Public Member Functions

Private Slots

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation